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Issue DateTitleAuthor(s)
2014-09-02A novel plasmid pEA68 of Erwinia amylovora and the description of a new family of plasmidsIsmail, Emadeldeen; Blom, Jochen; Bultreys, Alain; Ivanovic, Milan; Obradovic, Aleksa; van Doorn, Joop; Bergsma-Vlami, Maria; Maes, Martine; Willems, Anne; Duffy, Brion; Stockwell, Virginia O.; Smits, Theo H.M.; Pulawska, Joanna
2013-02-07Comparative genomics of 12 strains of Erwinia amylovora identifies a pan-genome with a large conserved coreMann, Rachel A.; Smits, Theo H.M.; Bühlmann, Andreas; Blom, Jochen; Goesmann, Alexander; Frey, Jürg E.; Plummer, Kim M.; Beer, Steven V.; Luck, Joanne; Duffy, Brion; Rodoni, Brendan
2014Comparative genomics of Erwinia amylovora isolates from MexicoSmits, Theo H.M.; Guerrero-Prieto, V. M.; Hernandez-Escarcega, G.; Rezzonico, Fabio; Blom, J.; Goesmann, A.; Duffy, Brion; Stockwell, V. O.
2015-06-11Complete genome sequence of the cyanogenic phosphate-solubilizing Pseudomonas sp. strain CCOS 191 : a close relative of Pseudomonas mosseliSmits, Theo H. M.; Pothier, Joël F.; Ruinelli, Michela; Blom, Jochen; Frasson, David; Koechli, Chantal; Fabbri, Carlotta; Brandl, Helmut; Duffy, Brion; Sievers, Martin
2013-08Complete sequence of Erwinia piriflorinigrans plasmids pEPIR37 and pEPIR5 and role of pEPIR37 in pathogen virulenceBarbé, Silva; Llop, Pablo; Blom, Jochen; Cabrefiga, Jose; Goesmann, Alexander; Duffy, Brion; Montesinos, E.; Smits, Theo H.M.; López, M. M.
2018-04-25Conservation tillage and organic farming induce minor variations in Pseudomonas abundance, their antimicrobial function and soil disease resistanceDennert, Francesca; Imperiali, Nicola; Staub, Cornelia; Schneider, Jana; Laessle, Titouan; Zhang, Tao; Wittwer, Raphaël; van der Heijden, Marcel G A; Smits, Theo H M; Schlaeppi, Klaus; Keel, Christoph; Maurhofer, Monika
2015-12-10Draft genome sequence of the commercial biocontrol strain Pantoea agglomerans P10cSmits, Theo H.M.; Rezzonico, Fabio; Blom, Jochen; Goesmann, Alexander; Abelli, Azzurra; Kron Morelli, Roberto; Vanneste, Joël L.; Duffy, Brion
2014-08-07Draft genome sequences for the onion center roth pathogen Pantoea ananatis PA4 and maize brown stalk rot pathogen P. ananatis BD442Weller-Stuart, Tania; Chan, Wai-Yin; Coutinho, Teresa A.; Venter, Stephanus N.; Smits, Theo H.M.; Duffy, Brion; Goszczynska, Teresa; Cowan, Don A.; de Maayer, Pieter
2018-01Emended description of the genus phytobacter, its type species phytobacter diazotrophicus (Zhang 2008) and description of phytobacter ursingii sp. novPillonetto, Marcelo; Arend, Lavinia N.; Faoro, Helisson; D'Espindula, Helena R. S.; Blom, Jochen; Smits, Theo H. M.; Mira, Marcelo T.; Rezzonico, Fabio
2017-11Erwinia amylovora in the genomics era : from genomes to pathogen virulence, regulation, and disease control strategiesSmits, Theo; Duffy, Brion; Sundin, George; Zhao, Youfu; Rezzonico, Fabio
2013-03Erwinia amylovora loop-mediated isothermal amplification (LAMP) assay for rapid pathogen detection and on-site diagnosis of fire blightBühlmann, Andreas; Pothier, F.; Rezzonico, Fabio; Smits, Theo H. M.; Andreou, Michael; Boonham, Neil; Duffy, Brion; Frey, Jürg E.
2016-03-01Erwinia gerundensis sp. nov. : a cosmopolitan epiphyte originally isolated from pome fruit treesRezzonico, Fabio; Smits, Theo; Born, Yannick; Blom, Jochen; Frey, Jürg E.; Goesmann, Alexander; Cleenwerck, Ilse; de Vos, Paul; Bonaterra, Anna; Duffy, Brion; Montesinos, Emilio
2017-11Erwinia species identification using matrix-assisted laser desorption ionization-time of flight mass spectrometryRezzonico, Fabio; Duffy, Brion; Smits, Theo H.M.; Pothier, Joël F.
2016-02-17Fire blight disease reactome : RNA-seq transcriptional profile of apple host plant defence responses to Erwinia amylovora pathogen infectionKamber, Tim; Buchmann, Jan P.; Pothier, Joël; Smits, Theo; Wicker, Thomas; Duffy, Brion
2018Genome-based population structure analysis of the strawberry plant pathogen Xanthomonas fragariae reveals two distinct groups that evolved independently before its species descriptionGétaz, Michael; Krijger, Marjon; Rezzonico, Fabio; Smits, Theo; van der Wolf, Jan M.; Pothier, Joël F.
2012-07-02Genomics-informed design of loop-mediated isothermal amplification for detection of phytopathogenic Xanthomonas arboricola pv. pruni at the intraspecific levelBühlmann, Andreas; Pothier, Joël F.; Tomlinson, Jennifer A.; Frey, Jürg F.; Boonham, N.; Smits, Theo H.M.; Duffy, Brion
2018-10-25High-quality draft genome sequence of pseudomonas wadenswilerensis CCOS 864TRutz, Dominik; Frasson, David; Sievers, Martin; Blom, Jochen; Rezzonico, Fabio; Pothier, Joël; Smits, Theo
2016Insect pathogenicity in plant-beneficial pseudomonads : phylogenetic distribution and comparative genomicsFlury, Pascale; Aellen, Nora; Ruffner, Beat; Péchy-Tarr, Maria; Fataar, Shakira; Metla, Zane; Dominguez-Ferreras, Ana; Bloemberg, Guido; Frey, Joachim; Goesmann, Alexander; Raaijmakers, Jos M; Duffy, Brion; Höfte, Monica; Blom, Jochen; Smits, Theo; Keel, Christoph; Maurhofer, Monika
2015-06-08Integrative conjugative elements of the ICEPan family play a potential role in Pantoea ananatis ecological diversification and antibiosisDe Maayer, Pieter; Chan, Wai-Yin; Martin, Douglas A.; Blom, Jochen; Venter, Stephanus N.; Duffy, Brion; Cowan, Don A.; Smits, Theo H. M.; Coutinho, Teresa A.
2017-05Microbial diversity in different compartments of an aquaponics systemSchmautz, Zala; Graber, Andreas; Jaenicke, Sebastian; Goesmann, Alexander; Junge, Ranka; Smits, Theo H. M.