| Publication type: | Conference paper |
| Type of review: | Peer review (publication) |
| Title: | Comparative genomics of Erwinia amylovora isolates from Mexico |
| Authors: | Smits, Theo H.M. Guerrero-Prieto, V. M. Hernandez-Escarcega, G. Rezzonico, Fabio Blom, J. Goesmann, A. Duffy, Brion Stockwell, V. O. |
| DOI: | 10.17660/ActaHortic.2014.1056.27 |
| Page(s): | 173 |
| Pages to: | 177 |
| Conference details: | XIII International Workshop on Fire Blight, Zurich, Switzerland, 2-5 July 2013 |
| Issue Date: | 2014 |
| Publisher / Ed. Institution: | International Society for Horticultural Science |
| ISSN: | 0567-7572 |
| Language: | English |
| Subjects: | Amylovora; Erwinia; Fireblight; Feuerbrand |
| Subject (DDC): | 570: Biology |
| Abstract: | Isolates of Erwinia amylovora from Mexico were collected and tested for their resistance to antibiotics used in orchards. Isolates with resistance to streptomycin were found, but no resistance to the commonly used antibiotics tetracycline and gentamicin was detected. The genomes of three isolates were sequenced and compared to reference genomes. The streptomycin resistance of two isolates was due to the common K43R mutation in rpsL. Analysis of the genomes revealed that the strains belong to CRISPR group I, which is common with strains from the Northeastern region of the USA and that each strain has a mutation in avrRpt2, which is present in strains that are able to overcome the resistance of Malus × robusta 5. |
| URI: | https://digitalcollection.zhaw.ch/handle/11475/1728 |
| Fulltext version: | Published version |
| License (according to publishing contract): | Licence according to publishing contract |
| Departement: | Life Sciences and Facility Management |
| Organisational Unit: | Institute of Natural Resource Sciences (IUNR) |
| Appears in collections: | Publikationen Life Sciences und Facility Management |
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Smits, T. H. M., Guerrero-Prieto, V. M., Hernandez-Escarcega, G., Rezzonico, F., Blom, J., Goesmann, A., Duffy, B., & Stockwell, V. O. (2014). Comparative genomics of Erwinia amylovora isolates from Mexico [Conference paper]. XIII International Workshop on Fire Blight, Zurich, Switzerland, 2-5 July 2013, 173–177. https://doi.org/10.17660/ActaHortic.2014.1056.27
Smits, T.H.M. et al. (2014) ‘Comparative genomics of Erwinia amylovora isolates from Mexico’, in XIII International Workshop on Fire Blight, Zurich, Switzerland, 2-5 July 2013. International Society for Horticultural Science, pp. 173–177. Available at: https://doi.org/10.17660/ActaHortic.2014.1056.27.
T. H. M. Smits et al., “Comparative genomics of Erwinia amylovora isolates from Mexico,” in XIII International Workshop on Fire Blight, Zurich, Switzerland, 2-5 July 2013, 2014, pp. 173–177. doi: 10.17660/ActaHortic.2014.1056.27.
SMITS, Theo H.M., V. M. GUERRERO-PRIETO, G. HERNANDEZ-ESCARCEGA, Fabio REZZONICO, J. BLOM, A. GOESMANN, Brion DUFFY und V. O. STOCKWELL, 2014. Comparative genomics of Erwinia amylovora isolates from Mexico. In: XIII International Workshop on Fire Blight, Zurich, Switzerland, 2-5 July 2013. Conference paper. International Society for Horticultural Science. 2014. S. 173–177
Smits, Theo H.M., V. M. Guerrero-Prieto, G. Hernandez-Escarcega, Fabio Rezzonico, J. Blom, A. Goesmann, Brion Duffy, and V. O. Stockwell. 2014. “Comparative Genomics of Erwinia Amylovora Isolates from Mexico.” Conference paper. In XIII International Workshop on Fire Blight, Zurich, Switzerland, 2-5 July 2013, 173–77. International Society for Horticultural Science. https://doi.org/10.17660/ActaHortic.2014.1056.27.
Smits, Theo H. M., et al. “Comparative Genomics of Erwinia Amylovora Isolates from Mexico.” XIII International Workshop on Fire Blight, Zurich, Switzerland, 2-5 July 2013, International Society for Horticultural Science, 2014, pp. 173–77, https://doi.org/10.17660/ActaHortic.2014.1056.27.
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