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Issue DateTitleAuthor(s)
2017-09A diagnostic tool for improved detection of Xanthomonas fragariae using a rapid and highly specific LAMP assay designed with comparative genomicsGétaz, Michael; Bühlmann, Andreas; Schneeberger, Pierre H. H.; Van Malderghem, Cinzia; Duffy, Brion; Maes, Martine; Pothier, Joël F.; Cottyn, Bart
2014-09-02A novel plasmid pEA68 of Erwinia amylovora and the description of a new family of plasmidsIsmail, Emadeldeen; Blom, Jochen; Bultreys, Alain; Ivanovic, Milan; Obradovic, Aleksa; van Doorn, Joop; Bergsma-Vlami, Maria; Maes, Martine; Willems, Anne; Duffy, Brion; Stockwell, Virginia O.; Smits, Theo H.M.; Pulawska, Joanna
2013-02-07Comparative genomics of 12 strains of Erwinia amylovora identifies a pan-genome with a large conserved coreMann, Rachel A.; Smits, Theo H.M.; Bühlmann, Andreas; Blom, Jochen; Goesmann, Alexander; Frey, Jürg E.; Plummer, Kim M.; Beer, Steven V.; Luck, Joanne; Duffy, Brion; Rodoni, Brendan
2014Comparative genomics of Erwinia amylovora isolates from MexicoSmits, Theo H.M.; Guerrero-Prieto, V. M.; Hernandez-Escarcega, G.; Rezzonico, Fabio; Blom, J.; Goesmann, A.; Duffy, Brion; Stockwell, V. O.
2016-06-06Comparative genomics-informed design of two LAMP detection assays for detection of the kiwifruit pathogen Pseudomonas syringae pv. actinidiae and discrimination of isolates belonging to the pandemic biovar 3Ruinelli, Michela; Schneeberger, Pierre H.H; Ferrante, Patrizia; Bühlmann, Andreas; Scortichini, Marco; Vanneste, Joel L.; Duffy, Brion; Pothier, Joël F.
2013-01-14Comparative RNA-Seq analysis of early-infected peach leaves by the invasive phytopathogen Xanthomonas arboricola pv. pruniSocquet-Juglard, Didier; Kamber, Tim; Pothier, Joël F.; Christen, Danilo; Gessler, Cesare; Duffy, Brion; Patocchi, Andrea
2015-06-11Complete genome sequence of the cyanogenic phosphate-solubilizing Pseudomonas sp. strain CCOS 191 : a close relative of Pseudomonas mosseliSmits, Theo H. M.; Pothier, Joël F.; Ruinelli, Michela; Blom, Jochen; Frasson, David; Koechli, Chantal; Fabbri, Carlotta; Brandl, Helmut; Duffy, Brion; Sievers, Martin
2013-08Complete sequence of Erwinia piriflorinigrans plasmids pEPIR37 and pEPIR5 and role of pEPIR37 in pathogen virulenceBarbé, Silva; Llop, Pablo; Blom, Jochen; Cabrefiga, Jose; Goesmann, Alexander; Duffy, Brion; Montesinos, E.; Smits, Theo H.M.; López, M. M.
2017-05-25Development and evaluation of a bioinformatics approach for designing molecular assays for viral detectionSchneeberger, Pierre H.H.; Pothier, Joël F.; Bühlmann, Andreas; Duffy, Brion; Beuret, Christian; Utzinger, Jürg; Frey, Jürg E.
2014-03-01Dickeya solani sp. nov., a pectinolytic plant-pathogenic bacterium isolated from potato (Solanum tuberosum)van der Wolf, Jan M.; Nijhuis, Els H.; Kowalewska, Malgorzata J.; Saddler, Gerry S.; Parkinson, Neil; Elphinstone, John G.; Pritchard, Leighton; Toth, Ian K.; Lojkowska, Ewa; Potrykus, Marta; Waleron, Malgorzata; de Vos, Paul; Cleenwerck, Ilse; Pirhonen, Minna; Garlant, Linda; Hélias, Valérie; Pothier, Joël F.; Pflüger, Valentin; Duffy, Brion; Tsror, Leah; Manulis, Shula
2016-02Do susceptible plants recognize their enemy?Rupp, Oliver; Nicot, Philippe; Fahrentrapp, Johannes; Rezzonico, Fabio; Duffy, Brion
2015-12-10Draft genome sequence of the commercial biocontrol strain Pantoea agglomerans P10cSmits, Theo H.M.; Rezzonico, Fabio; Blom, Jochen; Goesmann, Alexander; Abelli, Azzurra; Kron Morelli, Roberto; Vanneste, Joël L.; Duffy, Brion
2014-08-07Draft genome sequences for the onion center roth pathogen Pantoea ananatis PA4 and maize brown stalk rot pathogen P. ananatis BD442Weller-Stuart, Tania; Chan, Wai-Yin; Coutinho, Teresa A.; Venter, Stephanus N.; Smits, Theo H.M.; Duffy, Brion; Goszczynska, Teresa; Cowan, Don A.; de Maayer, Pieter
2017-11Erwinia amylovora in the genomics era : from genomes to pathogen virulence, regulation, and disease control strategiesSmits, Theo; Duffy, Brion; Sundin, George; Zhao, Youfu; Rezzonico, Fabio
2013-03Erwinia amylovora loop-mediated isothermal amplification (LAMP) assay for rapid pathogen detection and on-site diagnosis of fire blightBühlmann, Andreas; Pothier, F.; Rezzonico, Fabio; Smits, Theo H. M.; Andreou, Michael; Boonham, Neil; Duffy, Brion; Frey, Jürg E.
2016-03-01Erwinia gerundensis sp. nov. : a cosmopolitan epiphyte originally isolated from pome fruit treesRezzonico, Fabio; Smits, Theo; Born, Yannick; Blom, Jochen; Frey, Jürg E.; Goesmann, Alexander; Cleenwerck, Ilse; de Vos, Paul; Bonaterra, Anna; Duffy, Brion; Montesinos, Emilio
2017-11Erwinia species identification using matrix-assisted laser desorption ionization-time of flight mass spectrometryRezzonico, Fabio; Duffy, Brion; Smits, Theo H.M.; Pothier, Joël F.
2015-05Evaluation of a real-time PCR and a loop-mediated isothermal amplification for detection of Xanthomonas arboricola pv. pruni in plant tissue samplesPalacio-Bielsa, Ana; López-Soriano, Pablo; Bühlmann, Andreas; van Doorn, Joop; Pham, Khanh; Cambra, Miguel A.; Berruete, Isabel M.; Pothier, Joël F.; Duffy, Brion; Olmos, Antonio; López, María M.
2016-02-17Fire blight disease reactome : RNA-seq transcriptional profile of apple host plant defence responses to Erwinia amylovora pathogen infectionKamber, Tim; Buchmann, Jan P.; Pothier, Joël; Smits, Theo; Wicker, Thomas; Duffy, Brion
2012-07-02Genomics-informed design of loop-mediated isothermal amplification for detection of phytopathogenic Xanthomonas arboricola pv. pruni at the intraspecific levelBühlmann, Andreas; Pothier, Joël F.; Tomlinson, Jennifer A.; Frey, Jürg F.; Boonham, N.; Smits, Theo H.M.; Duffy, Brion