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https://doi.org/10.21256/zhaw-1491| Publication type: | Article in scientific journal |
| Type of review: | Peer review (publication) |
| Title: | Whole-genome sequencing of Erwinia amylovora strains from México detects SNPs in rpsL conferring streptomycin resistance and in the avrRpt2 effector altering host interactions |
| Authors: | Smits, Theo H. M. Guerrero-Prieto, Víctor M. Hernández-Escarcega, Germán Blom, Jochen Goesmann, Alexander Rezzonico, Fabio Duffy, Brion Stockwell, Virginia O. |
| DOI: | 10.21256/zhaw-1491 10.1128/genomeA.01229-13 |
| Published in: | Genome Announcements |
| Volume(Issue): | 2 |
| Issue: | 1 |
| Issue Date: | 2014 |
| Publisher / Ed. Institution: | American Society for Microbiology |
| ISSN: | 2169-8287 |
| Language: | English |
| Subject (DDC): | 570: Biology |
| Abstract: | We report draft genome sequences of three Mexican Erwinia amylovora strains. A novel plasmid, pEA78, was identified. Comparative genomics revealed an rpsL chromosomal mutation conferring high-level streptomycin resistance in two strains. In the effector gene avrRpt2, a single nucleotide polymorphism was detected that overcomes fire blight disease resistance in Malus × robusta 5. |
| URI: | https://digitalcollection.zhaw.ch/handle/11475/1710 |
| Fulltext version: | Published version |
| License (according to publishing contract): | CC BY 3.0: Attribution 3.0 Unported |
| Departement: | Life Sciences and Facility Management |
| Organisational Unit: | Institute of Natural Resource Sciences (IUNR) |
| Appears in collections: | Publikationen Life Sciences und Facility Management |
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| File | Description | Size | Format | |
|---|---|---|---|---|
| 2014_Smits_Whole-genome sequencing of Erwinia amylovora strains_Genome Announcements.pdf | 142.48 kB | Adobe PDF |  View/Open |
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Smits, T. H. M., Guerrero-Prieto, V. M., Hernández-Escarcega, G., Blom, J., Goesmann, A., Rezzonico, F., Duffy, B., & Stockwell, V. O. (2014). Whole-genome sequencing of Erwinia amylovora strains from México detects SNPs in rpsL conferring streptomycin resistance and in the avrRpt2 effector altering host interactions. Genome Announcements, 2(1). https://doi.org/10.21256/zhaw-1491
Smits, T.H.M. et al. (2014) ‘Whole-genome sequencing of Erwinia amylovora strains from México detects SNPs in rpsL conferring streptomycin resistance and in the avrRpt2 effector altering host interactions’, Genome Announcements, 2(1). Available at: https://doi.org/10.21256/zhaw-1491.
T. H. M. Smits et al., “Whole-genome sequencing of Erwinia amylovora strains from México detects SNPs in rpsL conferring streptomycin resistance and in the avrRpt2 effector altering host interactions,” Genome Announcements, vol. 2, no. 1, 2014, doi: 10.21256/zhaw-1491.
SMITS, Theo H. M., Víctor M. GUERRERO-PRIETO, Germán HERNÁNDEZ-ESCARCEGA, Jochen BLOM, Alexander GOESMANN, Fabio REZZONICO, Brion DUFFY und Virginia O. STOCKWELL, 2014. Whole-genome sequencing of Erwinia amylovora strains from México detects SNPs in rpsL conferring streptomycin resistance and in the avrRpt2 effector altering host interactions. Genome Announcements. 2014. Bd. 2, Nr. 1. DOI 10.21256/zhaw-1491
Smits, Theo H. M., Víctor M. Guerrero-Prieto, Germán Hernández-Escarcega, Jochen Blom, Alexander Goesmann, Fabio Rezzonico, Brion Duffy, and Virginia O. Stockwell. 2014. “Whole-Genome Sequencing of Erwinia Amylovora Strains from México Detects SNPs in rpsL Conferring Streptomycin Resistance and in the avrRpt2 Effector Altering Host Interactions.” Genome Announcements 2 (1). https://doi.org/10.21256/zhaw-1491.
Smits, Theo H. M., et al. “Whole-Genome Sequencing of Erwinia Amylovora Strains from México Detects SNPs in rpsL Conferring Streptomycin Resistance and in the avrRpt2 Effector Altering Host Interactions.” Genome Announcements, vol. 2, no. 1, 2014, https://doi.org/10.21256/zhaw-1491.
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