Whole-genome sequencing of Erwinia amylovora strains from México detects SNPs in rpsL conferring streptomycin resistance and in the avrRpt2 effector altering host interactions

Smits, Theo H. M.; Guerrero-Prieto, Víctor M.; Hernández-Escarcega, Germán; Blom, Jochen; Goesmann, Alexander; Rezzonico, Fabio; Duffy, Brion; Stockwell, Virginia O.

doi:10.21256/zhaw-1491

Please use this identifier to cite or link to this item: https://doi.org/10.21256/zhaw-1491

Full metadata record

DC Field	Value	Language
dc.contributor.author	Smits, Theo H. M.	-
dc.contributor.author	Guerrero-Prieto, Víctor M.	-
dc.contributor.author	Hernández-Escarcega, Germán	-
dc.contributor.author	Blom, Jochen	-
dc.contributor.author	Goesmann, Alexander	-
dc.contributor.author	Rezzonico, Fabio	-
dc.contributor.author	Duffy, Brion	-
dc.contributor.author	Stockwell, Virginia O.	-
dc.date.accessioned	2017-12-05T14:54:05Z	-
dc.date.available	2017-12-05T14:54:05Z	-
dc.date.issued	2014	-
dc.identifier.issn	2169-8287	de_CH
dc.identifier.uri	https://digitalcollection.zhaw.ch/handle/11475/1710	-
dc.description.abstract	We report draft genome sequences of three Mexican Erwinia amylovora strains. A novel plasmid, pEA78, was identified. Comparative genomics revealed an rpsL chromosomal mutation conferring high-level streptomycin resistance in two strains. In the effector gene avrRpt2, a single nucleotide polymorphism was detected that overcomes fire blight disease resistance in Malus × robusta 5.	de_CH
dc.language.iso	en	de_CH
dc.publisher	American Society for Microbiology	de_CH
dc.relation.ispartof	Genome Announcements	de_CH
dc.rights	http://creativecommons.org/licenses/by/3.0/	de_CH
dc.subject.ddc	570: Biologie	de_CH
dc.title	Whole-genome sequencing of Erwinia amylovora strains from México detects SNPs in rpsL conferring streptomycin resistance and in the avrRpt2 effector altering host interactions	de_CH
dc.type	Beitrag in wissenschaftlicher Zeitschrift	de_CH
dcterms.type	Text	de_CH
zhaw.departement	Life Sciences und Facility Management	de_CH
zhaw.organisationalunit	Institut für Umwelt und Natürliche Ressourcen (IUNR)	de_CH
dc.identifier.doi	10.21256/zhaw-1491	-
dc.identifier.doi	10.1128/genomeA.01229-13	de_CH
zhaw.funding.eu	No	de_CH
zhaw.issue	1	de_CH
zhaw.originated.zhaw	Yes	de_CH
zhaw.publication.status	publishedVersion	de_CH
zhaw.volume	2	de_CH
zhaw.publication.review	Peer review (Publikation)	de_CH
zhaw.webfeed	Umweltgenomik	de_CH
Appears in collections:	Publikationen Life Sciences und Facility Management

Files in This Item:

File	Description	Size	Format
2014_Smits_Whole-genome sequencing of Erwinia amylovora strains_Genome Announcements.pdf		142.48 kB	Adobe PDF	View/Open

Show simple item record

Smits, T. H. M., Guerrero-Prieto, V. M., Hernández-Escarcega, G., Blom, J., Goesmann, A., Rezzonico, F., Duffy, B., & Stockwell, V. O. (2014). Whole-genome sequencing of Erwinia amylovora strains from México detects SNPs in rpsL conferring streptomycin resistance and in the avrRpt2 effector altering host interactions. Genome Announcements, 2(1). https://doi.org/10.21256/zhaw-1491

Smits, T.H.M. et al. (2014) ‘Whole-genome sequencing of Erwinia amylovora strains from México detects SNPs in rpsL conferring streptomycin resistance and in the avrRpt2 effector altering host interactions’, Genome Announcements, 2(1). Available at: https://doi.org/10.21256/zhaw-1491.

T. H. M. Smits et al., “Whole-genome sequencing of Erwinia amylovora strains from México detects SNPs in rpsL conferring streptomycin resistance and in the avrRpt2 effector altering host interactions,” Genome Announcements, vol. 2, no. 1, 2014, doi: 10.21256/zhaw-1491.

SMITS, Theo H. M., Víctor M. GUERRERO-PRIETO, Germán HERNÁNDEZ-ESCARCEGA, Jochen BLOM, Alexander GOESMANN, Fabio REZZONICO, Brion DUFFY und Virginia O. STOCKWELL, 2014. Whole-genome sequencing of Erwinia amylovora strains from México detects SNPs in rpsL conferring streptomycin resistance and in the avrRpt2 effector altering host interactions. Genome Announcements. 2014. Bd. 2, Nr. 1. DOI 10.21256/zhaw-1491

Smits, Theo H. M., Víctor M. Guerrero-Prieto, Germán Hernández-Escarcega, Jochen Blom, Alexander Goesmann, Fabio Rezzonico, Brion Duffy, and Virginia O. Stockwell. 2014. “Whole-Genome Sequencing of Erwinia Amylovora Strains from México Detects SNPs in rpsL Conferring Streptomycin Resistance and in the avrRpt2 Effector Altering Host Interactions.” Genome Announcements 2 (1). https://doi.org/10.21256/zhaw-1491.

Smits, Theo H. M., et al. “Whole-Genome Sequencing of Erwinia Amylovora Strains from México Detects SNPs in rpsL Conferring Streptomycin Resistance and in the avrRpt2 Effector Altering Host Interactions.” Genome Announcements, vol. 2, no. 1, 2014, https://doi.org/10.21256/zhaw-1491.