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Issue DateTitleInvolved Person(s)
Apr-2023A novel hypervariable variable number tandem repeat in the dopamine transporter gene (SLC6A3)Apsley, Abner T.; Domico, Emma R.; Verbiest, Max A.; Brogan, Carly A.; Buck, Evan R.; Burich, Andrew J.; Cardone, Kathleen M.; Stone, Wesley J.; Anisimova, Maria; Vandenbergh, David J.
26-Oct-2022Mutation and selection processes regulating short tandem repeats give rise to genetic and phenotypic diversity across speciesVerbiest, Max; Maksimov, Mikhail; Jin, Ye; Anisimova, Maria; Gymrek, Melissa; Bilgin Sonay, Tugce
22-Jul-2022ARPIP : ancestral sequence reconstruction with insertions and deletions under the poisson indel processJowkar, Gholamhossein; Pecerska, Julija; Maiolo, Massimo; Gil, Manuel; Anisimova, Maria
2-Sep-2021Image-based assessment of extracellular mucin-to-tumor area predicts consensus molecular subtypes (CMS) in colorectal cancerNguyen, Huu-Giao; Lundström, Oxana; Blank, Annika; Dawson, Heather; Lugli, Alessandro; Anisimova, Maria; Zlobec, Inti
25-Jun-2021TRAL 2.0 : tandem repeat detection with circular profile hidden Markov models and evolutionary alignerDelucchi, Matteo; Näf, Paulina; Bliven, Spencer; Anisimova, Maria
8-Jun-2021Beyond microsatellite instability : intrinsic disorder as a potential link between protein short tandem repeats and cancerVerbiest, Max; Delucchi, Matteo; Bilgin Sonay, Tugce; Anisimova, Maria
6-Nov-2020Accelerating phylogeny-aware alignment with indel evolution using short time Fourier transformMaiolo, Massimo; Ulzega, Simone; Gil, Manuel; Anisimova, Maria
9-Apr-2020A new census of protein tandem repeats and their relationship with intrinsic disorderDelucchi, Matteo; Schaper, Elke; Sachenkova, Oxana; Elofsson, Arne; Anisimova, Maria