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dc.contributor.authorPillonetto, Marcelo-
dc.contributor.authorArend, Lavinia N.-
dc.contributor.authorFaoro, Helisson-
dc.contributor.authorD'Espindula, Helena R. S.-
dc.contributor.authorBlom, Jochen-
dc.contributor.authorSmits, Theo H. M.-
dc.contributor.authorMira, Marcelo T.-
dc.contributor.authorRezzonico, Fabio-
dc.date.accessioned2018-02-08T14:35:33Z-
dc.date.available2018-02-08T14:35:33Z-
dc.date.issued2018-01-
dc.identifier.issn1466-5026de_CH
dc.identifier.issn1466-5034de_CH
dc.identifier.urihttps://digitalcollection.zhaw.ch/handle/11475/2713-
dc.description.abstractThe species Phytobacter diazotrophicus and the associated genus Phytobacter were originally described by Zhanget al. on the basis of few endophytic nitrogen-fixing bacteria isolated from wild rice (Oryza rufipogon) in China. In this study, we demonstrate that a number of clinical isolates that were either described in the literature, preserved in culture collections, or obtained during a 2013 multi-state sepsis outbreak in Brazil also belong to the same genus. 16S rRNA gene sequencing, multilocus sequence analysis based on gyrB, rpoB, atpD and infB genes, as well as digital DNA-DNA hybridization support the existence of a second species within the genus Phytobacter. All isolates from the recent Brazilian outbreak, along with some older American clinical strains, were found to belong to the already described species Phytobacterdiazotrophicus, whereas three clinical strains retrieved in the USA over a time span of almost four decades, could be assigned to a new Phytobacter species. Implementation of an extended set of biochemical tests showed that the two Phytobacter species could phenotypically be discriminated from each other by the ability to utilize l-sorbose and d-serine. This feature was limited to the strains of the novel species described herein, for which the name Phytobacter ursingii sp. nov. is proposed, with ATCC 27989T (=CNCTC 5729T) as the designated type strain. An emended description of the species Phytobacter diazotrophicus and of the genus Phytobacter is also provided.de_CH
dc.language.isoende_CH
dc.publisherMicrobiology Societyde_CH
dc.relation.ispartofInternational Journal of Systematic and Evolutionary Microbiologyde_CH
dc.rightsLicence according to publishing contractde_CH
dc.subjectErwinia herbicolade_CH
dc.subjectPantoea agglomeransde_CH
dc.subjectMisidentificationde_CH
dc.subjectOutbreakde_CH
dc.subjectSepsisde_CH
dc.subjectTotal parenteral nutritionde_CH
dc.subject.ddc570: Biologiede_CH
dc.titleEmended description of the genus phytobacter, its type species phytobacter diazotrophicus (Zhang 2008) and description of phytobacter ursingii sp. novde_CH
dc.typeBeitrag in wissenschaftlicher Zeitschriftde_CH
dcterms.typeTextde_CH
zhaw.departementLife Sciences und Facility Managementde_CH
zhaw.organisationalunitInstitut für Umwelt und Natürliche Ressourcen (IUNR)de_CH
dc.identifier.doi10.1099/ijsem.0.002477de_CH
dc.identifier.pmid29125457de_CH
zhaw.funding.euNode_CH
zhaw.originated.zhawYesde_CH
zhaw.pages.end184de_CH
zhaw.pages.start176de_CH
zhaw.publication.statuspublishedVersionde_CH
zhaw.volume68de_CH
zhaw.publication.reviewPeer review (Publikation)de_CH
zhaw.webfeedUmweltgenomikde_CH
zhaw.funding.zhawSepsis-Associated Microorganisms in Brazilian Ambulatories (SAMBA)de_CH
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Pillonetto, M., Arend, L. N., Faoro, H., D’Espindula, H. R. S., Blom, J., Smits, T. H. M., Mira, M. T., & Rezzonico, F. (2018). Emended description of the genus phytobacter, its type species phytobacter diazotrophicus (Zhang 2008) and description of phytobacter ursingii sp. nov. International Journal of Systematic and Evolutionary Microbiology, 68, 176–184. https://doi.org/10.1099/ijsem.0.002477
Pillonetto, M. et al. (2018) ‘Emended description of the genus phytobacter, its type species phytobacter diazotrophicus (Zhang 2008) and description of phytobacter ursingii sp. nov’, International Journal of Systematic and Evolutionary Microbiology, 68, pp. 176–184. Available at: https://doi.org/10.1099/ijsem.0.002477.
M. Pillonetto et al., “Emended description of the genus phytobacter, its type species phytobacter diazotrophicus (Zhang 2008) and description of phytobacter ursingii sp. nov,” International Journal of Systematic and Evolutionary Microbiology, vol. 68, pp. 176–184, Jan. 2018, doi: 10.1099/ijsem.0.002477.
PILLONETTO, Marcelo, Lavinia N. AREND, Helisson FAORO, Helena R. S. D’ESPINDULA, Jochen BLOM, Theo H. M. SMITS, Marcelo T. MIRA und Fabio REZZONICO, 2018. Emended description of the genus phytobacter, its type species phytobacter diazotrophicus (Zhang 2008) and description of phytobacter ursingii sp. nov. International Journal of Systematic and Evolutionary Microbiology. Januar 2018. Bd. 68, S. 176–184. DOI 10.1099/ijsem.0.002477
Pillonetto, Marcelo, Lavinia N. Arend, Helisson Faoro, Helena R. S. D’Espindula, Jochen Blom, Theo H. M. Smits, Marcelo T. Mira, and Fabio Rezzonico. 2018. “Emended Description of the Genus Phytobacter, Its Type Species Phytobacter Diazotrophicus (Zhang 2008) and Description of Phytobacter Ursingii Sp. Nov.” International Journal of Systematic and Evolutionary Microbiology 68 (January): 176–84. https://doi.org/10.1099/ijsem.0.002477.
Pillonetto, Marcelo, et al. “Emended Description of the Genus Phytobacter, Its Type Species Phytobacter Diazotrophicus (Zhang 2008) and Description of Phytobacter Ursingii Sp. Nov.” International Journal of Systematic and Evolutionary Microbiology, vol. 68, Jan. 2018, pp. 176–84, https://doi.org/10.1099/ijsem.0.002477.


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