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https://doi.org/10.21256/zhaw-24450| Publikationstyp: | Beitrag in wissenschaftlicher Zeitschrift |
| Art der Begutachtung: | Peer review (Publikation) |
| Titel: | Resolving taxonomic confusion : establishing the genus Phytobacter on the list of clinically relevant Enterobacteriaceae |
| Autor/-in: | Smits, Theo H. M. Arend, Lavinia N. V. S. Cardew, Sofia Tång-Hallbäck, Erika Mira, Marcelo T. Moore, Edward R. B. Sampaio, Jorge L. M. Rezzonico, Fabio Pillonetto, Marcelo |
| et. al: | No |
| DOI: | 10.1007/s10096-022-04413-8 10.21256/zhaw-24450 |
| Erschienen in: | European Journal of Clinical Microbiology & Infectious Diseases |
| Band(Heft): | 41 |
| Heft: | 4 |
| Seite(n): | 547 |
| Seiten bis: | 558 |
| Erscheinungsdatum: | 15-Feb-2022 |
| Verlag / Hrsg. Institution: | Springer |
| ISSN: | 0934-9723 1435-4373 |
| Sprache: | Englisch |
| Schlagwörter: | Phytobacter diazotrophicus; Phytobacter ursingii; Phytobacter palmae; Genomics; Identification; Taxonomy |
| Fachgebiet (DDC): | 579: Mikrobiologie |
| Zusammenfassung: | Although many clinically significant strains belonging to the family Enterobacteriaceae fall into a restricted number of genera and species, there is still a substantial number of isolates that elude this classification and for which proper identification remains challenging. With the current improvements in the field of genomics, it is not only possible to generate high-quality data to accurately identify individual nosocomial isolates at the species level and understand their pathogenic potential but also to analyse retrospectively the genome sequence databases to identify past recurrences of a specific organism, particularly those originally published under an incorrect or outdated taxonomy. We propose a general use of this approach to classify further clinically relevant taxa, i.e., Phytobacter spp., that have so far gone unrecognised due to unsatisfactory identification procedures in clinical diagnostics. Here, we present a genomics and literature-based approach to establish the importance of the genus Phytobacter as a clinically relevant member of the Enterobacteriaceae family. |
| URI: | https://digitalcollection.zhaw.ch/handle/11475/24450 |
| Volltext Version: | Publizierte Version |
| Lizenz (gemäss Verlagsvertrag): | CC BY 4.0: Namensnennung 4.0 International |
| Departement: | Life Sciences und Facility Management |
| Organisationseinheit: | Institut für Umwelt und Natürliche Ressourcen (IUNR) |
| Publiziert im Rahmen des ZHAW-Projekts: | Sepsis-Associated Microorganisms in Brazilian Ambulatories (SAMBA) Antibiotic resistances in Enterobacteria |
| Enthalten in den Sammlungen: | Publikationen Life Sciences und Facility Management |
Dateien zu dieser Ressource:
| Datei | Beschreibung | Größe | Format | |
|---|---|---|---|---|
| 2022_Smits-etal_Resolving-taxonomic-confusion-Phytobacter.pdf | 1.79 MB | Adobe PDF |  Öffnen/Anzeigen |
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Smits, T. H. M., Arend, L. N. V. S., Cardew, S., Tång-Hallbäck, E., Mira, M. T., Moore, E. R. B., Sampaio, J. L. M., Rezzonico, F., & Pillonetto, M. (2022). Resolving taxonomic confusion : establishing the genus Phytobacter on the list of clinically relevant Enterobacteriaceae. European Journal of Clinical Microbiology & Infectious Diseases, 41(4), 547–558. https://doi.org/10.1007/s10096-022-04413-8
Smits, T.H.M. et al. (2022) ‘Resolving taxonomic confusion : establishing the genus Phytobacter on the list of clinically relevant Enterobacteriaceae’, European Journal of Clinical Microbiology & Infectious Diseases, 41(4), pp. 547–558. Available at: https://doi.org/10.1007/s10096-022-04413-8.
T. H. M. Smits et al., “Resolving taxonomic confusion : establishing the genus Phytobacter on the list of clinically relevant Enterobacteriaceae,” European Journal of Clinical Microbiology & Infectious Diseases, vol. 41, no. 4, pp. 547–558, Feb. 2022, doi: 10.1007/s10096-022-04413-8.
SMITS, Theo H. M., Lavinia N. V. S. AREND, Sofia CARDEW, Erika TÅNG-HALLBÄCK, Marcelo T. MIRA, Edward R. B. MOORE, Jorge L. M. SAMPAIO, Fabio REZZONICO und Marcelo PILLONETTO, 2022. Resolving taxonomic confusion : establishing the genus Phytobacter on the list of clinically relevant Enterobacteriaceae. European Journal of Clinical Microbiology & Infectious Diseases. 15 Februar 2022. Bd. 41, Nr. 4, S. 547–558. DOI 10.1007/s10096-022-04413-8
Smits, Theo H. M., Lavinia N. V. S. Arend, Sofia Cardew, Erika Tång-Hallbäck, Marcelo T. Mira, Edward R. B. Moore, Jorge L. M. Sampaio, Fabio Rezzonico, and Marcelo Pillonetto. 2022. “Resolving Taxonomic Confusion : Establishing the Genus Phytobacter on the List of Clinically Relevant Enterobacteriaceae.” European Journal of Clinical Microbiology & Infectious Diseases 41 (4): 547–58. https://doi.org/10.1007/s10096-022-04413-8.
Smits, Theo H. M., et al. “Resolving Taxonomic Confusion : Establishing the Genus Phytobacter on the List of Clinically Relevant Enterobacteriaceae.” European Journal of Clinical Microbiology & Infectious Diseases, vol. 41, no. 4, Feb. 2022, pp. 547–58, https://doi.org/10.1007/s10096-022-04413-8.
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