| Publikationstyp: | Beitrag in wissenschaftlicher Zeitschrift |
| Art der Begutachtung: | Peer review (Publikation) |
| Titel: | Phytobacter palmae sp. nov., a novel endophytic, N2 fixing, plant growth promoting Gammaproteobacterium isolated from oil palm (Elaeis guineensis Jacq.) |
| Autor/-in: | Madhaiyan, Munusamy Saravanan, Venkatakrishnan Sivaraj Blom, Jochen Smits, Theo Rezzonico, Fabio Kim, Soo-Jin Weon, Hang-Yeon Kwon, Soon-Wo Whitman, William B. Ji, Lianghui |
| et. al: | No |
| DOI: | 10.1099/ijsem.0.003834 |
| Erschienen in: | International Journal of Systematic and Evolutionary Microbiology |
| Band(Heft): | 70 |
| Heft: | 2 |
| Seite(n): | 841 |
| Seiten bis: | 848 |
| Erscheinungsdatum: | Feb-2020 |
| Verlag / Hrsg. Institution: | Microbiology Society |
| ISSN: | 1466-5026 1466-5034 |
| Sprache: | Englisch |
| Schlagwörter: | Endophytes; Enterobacterales; Enterobacteriaceae; Nitrogen fixation; Phytobacter |
| Fachgebiet (DDC): | 570: Biologie |
| Zusammenfassung: | A novel strain S29T with high nitrogen fixing ability was isolated from surface-sterilized leaf tissues of oil palm (Elaeis guineensis) growing in Science Park II, Singapore. On the basis of 16S rRNA gene analysis and multilocus sequence typing with the rpoB, gyrB, infB and atpD genes, strain S29T was a member of the genus Phytobacter , with Phytobacter ursingii ATCC 27989T and Phytobacter diazotrophicus LS 8T as its closest relatives. Unique biochemical features that differentiated strain S29T from its closest relatives were the ability to utilize melibiose, α-cyclodextrin, glycogen, adonital, D-arabitol, m-inositol and xylitol. The major fatty acids were C14 : 0, C16 : 0, C17 : 0, C16 : 1 ω5c and summed feature 2 containing C16 : 1 ω7c and/or C16 : 1 ω6c. The polar fatty acid profile consisted of phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, an unidentified aminophospholipid and aminolipids. The draft genome of strain S29T comprised 5, 284, 330 bp with a G + C content of 52.6 %. The average nucleotide identity and digital DNA–DNA hybridization values between strain S29T and the phylogenetically related Enterobacterales species were lower than 95 % and 70 %, respectively. Thus, the polyphasic evidences generated through the phenotypic, chemotaxonomic and genomic methods confirmed that strain S29T represents a novel species of the genus Phytobacter , for which we propose the name Phytobacter palmae sp. nov. with the type strain of S29T (=DSM 27342T=KACC 17598T). |
| URI: | https://digitalcollection.zhaw.ch/handle/11475/18953 |
| Volltext Version: | Publizierte Version |
| Lizenz (gemäss Verlagsvertrag): | Lizenz gemäss Verlagsvertrag |
| Departement: | Life Sciences und Facility Management |
| Organisationseinheit: | Institut für Umwelt und Natürliche Ressourcen (IUNR) |
| Publiziert im Rahmen des ZHAW-Projekts: | Sepsis-Associated Microorganisms in Brazilian Ambulatories (SAMBA) |
| Enthalten in den Sammlungen: | Publikationen Life Sciences und Facility Management |
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Madhaiyan, M., Saravanan, V. S., Blom, J., Smits, T., Rezzonico, F., Kim, S.-J., Weon, H.-Y., Kwon, S.-W., Whitman, W. B., & Ji, L. (2020). Phytobacter palmae sp. nov., a novel endophytic, N2 fixing, plant growth promoting Gammaproteobacterium isolated from oil palm (Elaeis guineensis Jacq.). International Journal of Systematic and Evolutionary Microbiology, 70(2), 841–848. https://doi.org/10.1099/ijsem.0.003834
Madhaiyan, M. et al. (2020) ‘Phytobacter palmae sp. nov., a novel endophytic, N2 fixing, plant growth promoting Gammaproteobacterium isolated from oil palm (Elaeis guineensis Jacq.)’, International Journal of Systematic and Evolutionary Microbiology, 70(2), pp. 841–848. Available at: https://doi.org/10.1099/ijsem.0.003834.
M. Madhaiyan et al., “Phytobacter palmae sp. nov., a novel endophytic, N2 fixing, plant growth promoting Gammaproteobacterium isolated from oil palm (Elaeis guineensis Jacq.),” International Journal of Systematic and Evolutionary Microbiology, vol. 70, no. 2, pp. 841–848, Feb. 2020, doi: 10.1099/ijsem.0.003834.
MADHAIYAN, Munusamy, Venkatakrishnan Sivaraj SARAVANAN, Jochen BLOM, Theo SMITS, Fabio REZZONICO, Soo-Jin KIM, Hang-Yeon WEON, Soon-Wo KWON, William B. WHITMAN und Lianghui JI, 2020. Phytobacter palmae sp. nov., a novel endophytic, N2 fixing, plant growth promoting Gammaproteobacterium isolated from oil palm (Elaeis guineensis Jacq.). International Journal of Systematic and Evolutionary Microbiology. Februar 2020. Bd. 70, Nr. 2, S. 841–848. DOI 10.1099/ijsem.0.003834
Madhaiyan, Munusamy, Venkatakrishnan Sivaraj Saravanan, Jochen Blom, Theo Smits, Fabio Rezzonico, Soo-Jin Kim, Hang-Yeon Weon, Soon-Wo Kwon, William B. Whitman, and Lianghui Ji. 2020. “Phytobacter Palmae Sp. Nov., A Novel Endophytic, N2 Fixing, Plant Growth Promoting Gammaproteobacterium Isolated from Oil Palm (Elaeis Guineensis Jacq.).” International Journal of Systematic and Evolutionary Microbiology 70 (2): 841–48. https://doi.org/10.1099/ijsem.0.003834.
Madhaiyan, Munusamy, et al. “Phytobacter Palmae Sp. Nov., A Novel Endophytic, N2 Fixing, Plant Growth Promoting Gammaproteobacterium Isolated from Oil Palm (Elaeis Guineensis Jacq.).” International Journal of Systematic and Evolutionary Microbiology, vol. 70, no. 2, Feb. 2020, pp. 841–48, https://doi.org/10.1099/ijsem.0.003834.
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