| Publikationstyp: | Beitrag in wissenschaftlicher Zeitschrift |
| Art der Begutachtung: | Peer review (Publikation) |
| Titel: | Pseudomonas cerasi sp. nov. (non Griffin, 1911) isolated from diseased tissue of cherry |
| Autor/-in: | Kałużna, Monika Willems, Anne Pothier, Joël F. Ruinelli, Michela Sobiczewski, Piotr Puławska, Joanna |
| DOI: | 10.1016/j.syapm.2016.05.005 |
| Erschienen in: | Systematic and Applied Microbiology |
| Band(Heft): | 39 |
| Heft: | 6 |
| Seite(n): | 370 |
| Seiten bis: | 377 |
| Erscheinungsdatum: | Sep-2016 |
| Verlag / Hrsg. Institution: | Elsevier |
| Verlag / Hrsg. Institution: | Amsterdam |
| ISSN: | 0723-2020 1618-0984 |
| Sprache: | Englisch |
| Schlagwörter: | Pseudomonas sp; Cherry bacterial canker; DNA–DNA hybridization; Genome; MLSA; MALDI-TOF MS; FAME |
| Fachgebiet (DDC): | 570: Biologie |
| Zusammenfassung: | Eight isolates of Gram-negative fluorescent bacteria (58T, 122, 374, 791, 963, 966, 970a and 1021) were obtained from diseased tissue of cherry trees from different regions of Poland. The symptoms resembled those of bacterial canker. Based on an analysis of 16S rDNA sequences the isolates shared the highest over 99.9% similarity with Pseudomonas ficuserectae JCM 2400T and Pseudomonas congelans DSM 14939T. Phylogenetic analysis using housekeeping genes gyrB, rpoD and rpoB revealed that they form a separate cluster and confirmed their closest relation to P. syringae NCPPB 281T and P. congelans LMG 21466T. DNA–DNA hybridization between the cherry isolate 58T and the type strains of these two closely related species revealed relatedness values of 58.2% and 41.9%, respectively. This was further supported by Average Nucleotide Identity (ANIb) and Genome-to-Genome Distance (GGDC) between the whole genome sequences of strain LMG 28609T and closely related Pseudomonas species. The major cellular fatty acids are 16:0 and summed feature 3 (16:1 ω7c/15:0 iso 2OH). Phenotypic characteristics differentiated the novel isolates from other closely related species. The G + C content of the genomic DNA of strain 58T was 59%. The diversity was proved by PCR MP and BOX PCR, eliminating the possibility that they constitute a clonal population. Based on the evidence of this polyphasic taxonomic study the eight strains are considered to represent a novel species of the genus Pseudomonas for which the name Pseudomonas cerasi sp. nov. (non Griffin, 1911) is proposed. The type strain of this species is 58T (= LMG 28609T = CFBP 8305T). |
| URI: | https://digitalcollection.zhaw.ch/handle/11475/1663 |
| Volltext Version: | Publizierte Version |
| Lizenz (gemäss Verlagsvertrag): | Lizenz gemäss Verlagsvertrag |
| Departement: | Life Sciences und Facility Management |
| Organisationseinheit: | Institut für Umwelt und Natürliche Ressourcen (IUNR) |
| Publiziert im Rahmen des ZHAW-Projekts: | COST Action FA1104 – Sustainable production of high quality cherries for the European market |
| Enthalten in den Sammlungen: | Publikationen Life Sciences und Facility Management |
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Kałużna, M., Willems, A., Pothier, J. F., Ruinelli, M., Sobiczewski, P., & Puławska, J. (2016). Pseudomonas cerasi sp. nov. (non Griffin, 1911) isolated from diseased tissue of cherry. Systematic and Applied Microbiology, 39(6), 370–377. https://doi.org/10.1016/j.syapm.2016.05.005
Kałużna, M. et al. (2016) ‘Pseudomonas cerasi sp. nov. (non Griffin, 1911) isolated from diseased tissue of cherry’, Systematic and Applied Microbiology, 39(6), pp. 370–377. Available at: https://doi.org/10.1016/j.syapm.2016.05.005.
M. Kałużna, A. Willems, J. F. Pothier, M. Ruinelli, P. Sobiczewski, and J. Puławska, “Pseudomonas cerasi sp. nov. (non Griffin, 1911) isolated from diseased tissue of cherry,” Systematic and Applied Microbiology, vol. 39, no. 6, pp. 370–377, Sep. 2016, doi: 10.1016/j.syapm.2016.05.005.
KAŁUŻNA, Monika, Anne WILLEMS, Joël F. POTHIER, Michela RUINELLI, Piotr SOBICZEWSKI und Joanna PUŁAWSKA, 2016. Pseudomonas cerasi sp. nov. (non Griffin, 1911) isolated from diseased tissue of cherry. Systematic and Applied Microbiology. September 2016. Bd. 39, Nr. 6, S. 370–377. DOI 10.1016/j.syapm.2016.05.005
Kałużna, Monika, Anne Willems, Joël F. Pothier, Michela Ruinelli, Piotr Sobiczewski, and Joanna Puławska. 2016. “Pseudomonas Cerasi Sp. Nov. (Non Griffin, 1911) Isolated from Diseased Tissue of Cherry.” Systematic and Applied Microbiology 39 (6): 370–77. https://doi.org/10.1016/j.syapm.2016.05.005.
Kałużna, Monika, et al. “Pseudomonas Cerasi Sp. Nov. (Non Griffin, 1911) Isolated from Diseased Tissue of Cherry.” Systematic and Applied Microbiology, vol. 39, no. 6, Sept. 2016, pp. 370–77, https://doi.org/10.1016/j.syapm.2016.05.005.
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