| Publikationstyp: | Beitrag in wissenschaftlicher Zeitschrift |
| Art der Begutachtung: | Peer review (Publikation) |
| Titel: | Emended description of the genus phytobacter, its type species phytobacter diazotrophicus (Zhang 2008) and description of phytobacter ursingii sp. nov |
| Autor/-in: | Pillonetto, Marcelo Arend, Lavinia N. Faoro, Helisson D'Espindula, Helena R. S. Blom, Jochen Smits, Theo H. M. Mira, Marcelo T. Rezzonico, Fabio |
| DOI: | 10.1099/ijsem.0.002477 |
| Erschienen in: | International Journal of Systematic and Evolutionary Microbiology |
| Band(Heft): | 68 |
| Seite(n): | 176 |
| Seiten bis: | 184 |
| Erscheinungsdatum: | Jan-2018 |
| Verlag / Hrsg. Institution: | Microbiology Society |
| ISSN: | 1466-5026 1466-5034 |
| Sprache: | Englisch |
| Schlagwörter: | Erwinia herbicola; Pantoea agglomerans; Misidentification; Outbreak; Sepsis; Total parenteral nutrition |
| Fachgebiet (DDC): | 570: Biologie |
| Zusammenfassung: | The species Phytobacter diazotrophicus and the associated genus Phytobacter were originally described by Zhanget al. on the basis of few endophytic nitrogen-fixing bacteria isolated from wild rice (Oryza rufipogon) in China. In this study, we demonstrate that a number of clinical isolates that were either described in the literature, preserved in culture collections, or obtained during a 2013 multi-state sepsis outbreak in Brazil also belong to the same genus. 16S rRNA gene sequencing, multilocus sequence analysis based on gyrB, rpoB, atpD and infB genes, as well as digital DNA-DNA hybridization support the existence of a second species within the genus Phytobacter. All isolates from the recent Brazilian outbreak, along with some older American clinical strains, were found to belong to the already described species Phytobacterdiazotrophicus, whereas three clinical strains retrieved in the USA over a time span of almost four decades, could be assigned to a new Phytobacter species. Implementation of an extended set of biochemical tests showed that the two Phytobacter species could phenotypically be discriminated from each other by the ability to utilize l-sorbose and d-serine. This feature was limited to the strains of the novel species described herein, for which the name Phytobacter ursingii sp. nov. is proposed, with ATCC 27989T (=CNCTC 5729T) as the designated type strain. An emended description of the species Phytobacter diazotrophicus and of the genus Phytobacter is also provided. |
| URI: | https://digitalcollection.zhaw.ch/handle/11475/2713 |
| Volltext Version: | Publizierte Version |
| Lizenz (gemäss Verlagsvertrag): | Lizenz gemäss Verlagsvertrag |
| Departement: | Life Sciences und Facility Management |
| Organisationseinheit: | Institut für Umwelt und Natürliche Ressourcen (IUNR) |
| Publiziert im Rahmen des ZHAW-Projekts: | Sepsis-Associated Microorganisms in Brazilian Ambulatories (SAMBA) |
| Enthalten in den Sammlungen: | Publikationen Life Sciences und Facility Management |
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Pillonetto, M., Arend, L. N., Faoro, H., D’Espindula, H. R. S., Blom, J., Smits, T. H. M., Mira, M. T., & Rezzonico, F. (2018). Emended description of the genus phytobacter, its type species phytobacter diazotrophicus (Zhang 2008) and description of phytobacter ursingii sp. nov. International Journal of Systematic and Evolutionary Microbiology, 68, 176–184. https://doi.org/10.1099/ijsem.0.002477
Pillonetto, M. et al. (2018) ‘Emended description of the genus phytobacter, its type species phytobacter diazotrophicus (Zhang 2008) and description of phytobacter ursingii sp. nov’, International Journal of Systematic and Evolutionary Microbiology, 68, pp. 176–184. Available at: https://doi.org/10.1099/ijsem.0.002477.
M. Pillonetto et al., “Emended description of the genus phytobacter, its type species phytobacter diazotrophicus (Zhang 2008) and description of phytobacter ursingii sp. nov,” International Journal of Systematic and Evolutionary Microbiology, vol. 68, pp. 176–184, Jan. 2018, doi: 10.1099/ijsem.0.002477.
PILLONETTO, Marcelo, Lavinia N. AREND, Helisson FAORO, Helena R. S. D’ESPINDULA, Jochen BLOM, Theo H. M. SMITS, Marcelo T. MIRA und Fabio REZZONICO, 2018. Emended description of the genus phytobacter, its type species phytobacter diazotrophicus (Zhang 2008) and description of phytobacter ursingii sp. nov. International Journal of Systematic and Evolutionary Microbiology. Januar 2018. Bd. 68, S. 176–184. DOI 10.1099/ijsem.0.002477
Pillonetto, Marcelo, Lavinia N. Arend, Helisson Faoro, Helena R. S. D’Espindula, Jochen Blom, Theo H. M. Smits, Marcelo T. Mira, and Fabio Rezzonico. 2018. “Emended Description of the Genus Phytobacter, Its Type Species Phytobacter Diazotrophicus (Zhang 2008) and Description of Phytobacter Ursingii Sp. Nov.” International Journal of Systematic and Evolutionary Microbiology 68 (January): 176–84. https://doi.org/10.1099/ijsem.0.002477.
Pillonetto, Marcelo, et al. “Emended Description of the Genus Phytobacter, Its Type Species Phytobacter Diazotrophicus (Zhang 2008) and Description of Phytobacter Ursingii Sp. Nov.” International Journal of Systematic and Evolutionary Microbiology, vol. 68, Jan. 2018, pp. 176–84, https://doi.org/10.1099/ijsem.0.002477.
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