Pseudomonas tructae sp. nov., novel species isolated from rainbow trout kidney

Oh, Woo Taek; Jun, Jin Woo; Giri, Sib Sankar; Yun, Saekil; Kim, Hyoun Joong; Kim, Sang Guen; Kim, Sang Wha; Kang, Jeong Woo; Han, Se Jin; Kwon, Jun; Kim, Ji Hyung; Smits, Theo H.M.; Park, Se Chang

doi:10.1099/ijsem.0.003696

Publication type:	Article in scientific journal
Type of review:	Peer review (publication)
Title:	Pseudomonas tructae sp. nov., novel species isolated from rainbow trout kidney
Authors:	Oh, Woo Taek Jun, Jin Woo Giri, Sib Sankar Yun, Saekil Kim, Hyoun Joong Kim, Sang Guen Kim, Sang Wha Kang, Jeong Woo Han, Se Jin Kwon, Jun Kim, Ji Hyung Smits, Theo H.M. Park, Se Chang
et. al:	No
DOI:	10.1099/ijsem.0.003696
Published in:	International Journal of Systematic and Evolutionary Microbiology
Volume(Issue):	69
Issue:	12
Page(s):	3851
Pages to:	3856
Issue Date:	5-Dec-2019
Publisher / Ed. Institution:	Microbiology Society
ISSN:	1466-5026 1466-5034
Language:	English
Subjects:	MLSA; Pseudomonas; Rainbow trout
Subject (DDC):	570: Biology 572: Biochemistry
Abstract:	This study describes the biochemical and phylogenetic characteristics of a Gram-negative strain, SNU WT1T, isolated from rainbow trout kidney. The 16S rRNA gene sequencing indicated that strain SNU WT1T was highly similar to Pseudomonas wadenswilerensis CCOS 864T and closely related to other Pseudomonas putida-related strains. Multilocus sequence analysis of concatenated partial gyrB, rpoB and rpoD sequences revealed that strain SNU WT1T was distinct from P. putida-related strains and formed a separate clade. The average nucleotide identity and Genome-to-Genome Distance Calculator values were 90.19 and 41.7 %with its closest relative P. wadenswilerensis CCOS 864T; however, it was phenotypically distinct from CCOS 864T with respect to arginine dihydrolase, glucose fermentation, aesculin hydrolysis and N-acetyl-glucosamine assimilation. The major polar lipid of the strain was phosphatidylethanolamine and the major quinone was Q-9. The genome of strain SNU WT1T had 5 685 196 bp with a G+C content of 61.83 mol%. We describe a novel species of genus Pseudomonas, for which the name Pseudomonastructae has been proposed, with SNU WT1T (=KCTC 72265=JCM 33436) as the type strain.
URI:	https://digitalcollection.zhaw.ch/handle/11475/18855
Fulltext version:	Published version
License (according to publishing contract):	Licence according to publishing contract
Departement:	Life Sciences and Facility Management
Organisational Unit:	Institute of Natural Resource Sciences (IUNR)
Published as part of the ZHAW project:	Sepsis-Associated Microorganisms in Brazilian Ambulatories (SAMBA)
Appears in collections:	Publikationen Life Sciences und Facility Management

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Oh, W. T., Jun, J. W., Giri, S. S., Yun, S., Kim, H. J., Kim, S. G., Kim, S. W., Kang, J. W., Han, S. J., Kwon, J., Kim, J. H., Smits, T. H. M., & Park, S. C. (2019). Pseudomonas tructae sp. nov., novel species isolated from rainbow trout kidney. International Journal of Systematic and Evolutionary Microbiology, 69(12), 3851–3856. https://doi.org/10.1099/ijsem.0.003696

Oh, W.T. et al. (2019) ‘Pseudomonas tructae sp. nov., novel species isolated from rainbow trout kidney’, International Journal of Systematic and Evolutionary Microbiology, 69(12), pp. 3851–3856. Available at: https://doi.org/10.1099/ijsem.0.003696.

W. T. Oh et al., “Pseudomonas tructae sp. nov., novel species isolated from rainbow trout kidney,” International Journal of Systematic and Evolutionary Microbiology, vol. 69, no. 12, pp. 3851–3856, Dec. 2019, doi: 10.1099/ijsem.0.003696.

OH, Woo Taek, Jin Woo JUN, Sib Sankar GIRI, Saekil YUN, Hyoun Joong KIM, Sang Guen KIM, Sang Wha KIM, Jeong Woo KANG, Se Jin HAN, Jun KWON, Ji Hyung KIM, Theo H.M. SMITS und Se Chang PARK, 2019. Pseudomonas tructae sp. nov., novel species isolated from rainbow trout kidney. International Journal of Systematic and Evolutionary Microbiology. 5 Dezember 2019. Bd. 69, Nr. 12, S. 3851–3856. DOI 10.1099/ijsem.0.003696

Oh, Woo Taek, Jin Woo Jun, Sib Sankar Giri, Saekil Yun, Hyoun Joong Kim, Sang Guen Kim, Sang Wha Kim, et al. 2019. “Pseudomonas Tructae Sp. Nov., Novel Species Isolated from Rainbow Trout Kidney.” International Journal of Systematic and Evolutionary Microbiology 69 (12): 3851–56. https://doi.org/10.1099/ijsem.0.003696.

Oh, Woo Taek, et al. “Pseudomonas Tructae Sp. Nov., Novel Species Isolated from Rainbow Trout Kidney.” International Journal of Systematic and Evolutionary Microbiology, vol. 69, no. 12, Dec. 2019, pp. 3851–56, https://doi.org/10.1099/ijsem.0.003696.