Please use this identifier to cite or link to this item:
Title: Qualitative microbiome profiling along a wastewater system in Kampala, Uganda
Authors : Schneeberger, Pierre H. H.
Fuhrimann, Samuel
Becker, Sören L.
Pothier, Joël F.
Duffy, Brion
Beuret, Christian
Frey, Jürg E.
Utzinger, Jürg
et. al : No
Published in : Scientific Reports
Volume(Issue) : 9
Issue : 1
Pages : 17334
Publisher / Ed. Institution : Nature Publishing Group
Issue Date: 22-Nov-2019
License (according to publishing contract) : CC BY 4.0: Attribution 4.0 International
Type of review: Peer review (publication)
Language : English
Subjects : Fresh water ecology; Water microbiology; Wetlands ecology
Subject (DDC) : 570: Biology
577: Ecology
Abstract: Kampala, the capital city of Uganda, is rapidly expanding without adequate wastewater treatment facilities to accommodate the current estimated population of 1.68 million people. Hence, freshwater bodies and natural ecosystems around the city are heavily polluted with organic and inorganic contaminants. Yet, there is a paucity of data on pathogenic microorganisms, which potentially threatens health of local communities. We performed a qualitative microbial analysis using a whole metagenome sequencing approach encompassing over 150 gigabases of sequencing data to characterize the Nakivubo wastewater system, which includes a wastewater channel and surrounding wetlands. We found that microbial diversity is heterogeneous throughout the system and that three community state types could be differentiated. We showed the presence of various waterborne agents of gastrointestinal infections in humans, which were associated with leakage occurring around two locations along the wastewater channel. Our data indicate that the microbial decontamination capacity of the local wastewater treatment facility was insufficient at the time of sampling, and that several areas of the wetlands were contaminated with human pathogens, indicating that parts of the wetlands are potentially unsafe for urban agriculture.
Departement: Life Sciences and Facility Management
Organisational Unit: Institute of Natural Resource Sciences (IUNR)
Publication type: Article in scientific journal
DOI : 10.1038/s41598-019-53569-5
ISSN: 2045-2322
Published as part of the ZHAW project : In-depth molecular analysis of stool and water samples collected in Kampala, Uganda
Appears in Collections:Publikationen Life Sciences und Facility Management

Files in This Item:
File Description SizeFormat 
Schneeberger_2019.pdfPublication3.75 MBAdobe PDFThumbnail
41598_2019_53569_MOESM1_ESM.pdfSupplementary Information327.08 kBAdobe PDFThumbnail
41598_2019_53569_MOESM2_ESM.zipSupplementary Table 2214.82 kBUnknownView/Open

Items in DSpace are protected by copyright, with all rights reserved, unless otherwise indicated.