Please use this identifier to cite or link to this item: https://doi.org/10.21256/zhaw-1472
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dc.contributor.authorDe Maayer, Pieter-
dc.contributor.authorChan, Wai-Yin-
dc.contributor.authorMartin, Douglas A.-
dc.contributor.authorBlom, Jochen-
dc.contributor.authorVenter, Stephanus N.-
dc.contributor.authorDuffy, Brion-
dc.contributor.authorCowan, Don A.-
dc.contributor.authorSmits, Theo H. M.-
dc.contributor.authorCoutinho, Teresa A.-
dc.date.accessioned2017-11-23T15:48:12Z-
dc.date.available2017-11-23T15:48:12Z-
dc.date.issued2015-06-08-
dc.identifier.issn1664-302Xde_CH
dc.identifier.urihttps://digitalcollection.zhaw.ch/handle/11475/1563-
dc.description.abstractPantoea ananatis is a highly versatile enterobacterium isolated from diverse environmental sources. The ecological diversity of this species may be attributed, in part, to the acquisition of mobile genetic elements. One such element is an Integrative and Conjugative Element (ICE). By means of in silico analyses the ICE elements belonging to a novel family, ICEPan, were identified in the genome sequences of five P. ananatis strains and characterized. PCR screening showed that ICEPan is prevalent among P. ananatis strains isolated from different environmental sources and geographic locations. Members of the ICEPan family share a common origin with ICEs of other enterobacteria, as well as conjugative plasmids of Erwinia spp. Aside from core modules for ICEPan integration, maintenance and dissemination, the ICEPan contain extensive non-conserved islands coding for proteins that may contribute toward various phenotypes such as stress response and antibiosis, and the highly diverse ICEPan thus plays a major role in the diversification of P. ananatis. An island is furthermore integrated within an ICEPan DNA repair-encoding locus umuDC and we postulate its role in stress-induced dissemination and/or expression of the genes on this island.de_CH
dc.language.isoende_CH
dc.publisherFrontiers Research Foundationde_CH
dc.relation.ispartofFrontiers in Microbiologyde_CH
dc.rightshttp://creativecommons.org/licenses/by/4.0/de_CH
dc.subjectPantoeade_CH
dc.subjectIntegrative and conjugative elementde_CH
dc.subjectumuCDde_CH
dc.subjectStress responsede_CH
dc.subject.ddc570: Biologiede_CH
dc.titleIntegrative conjugative elements of the ICEPan family play a potential role in Pantoea ananatis ecological diversification and antibiosisde_CH
dc.typeBeitrag in wissenschaftlicher Zeitschriftde_CH
dcterms.typeTextde_CH
zhaw.departementLife Sciences und Facility Managementde_CH
zhaw.organisationalunitInstitut für Umwelt und Natürliche Ressourcen (IUNR)de_CH
dc.identifier.doi10.21256/zhaw-1472-
dc.identifier.doi10.3389/fmicb.2015.00576de_CH
zhaw.funding.euNode_CH
zhaw.issue576de_CH
zhaw.originated.zhawYesde_CH
zhaw.publication.statuspublishedVersionde_CH
zhaw.volume6de_CH
zhaw.publication.reviewPeer review (Publikation)de_CH
zhaw.webfeedUmweltgenomikde_CH
zhaw.funding.zhawGenomik und Transkriptomik von Erwinia und Pantoeade_CH
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De Maayer, P., Chan, W.-Y., Martin, D. A., Blom, J., Venter, S. N., Duffy, B., Cowan, D. A., Smits, T. H. M., & Coutinho, T. A. (2015). Integrative conjugative elements of the ICEPan family play a potential role in Pantoea ananatis ecological diversification and antibiosis. Frontiers in Microbiology, 6(576). https://doi.org/10.21256/zhaw-1472
De Maayer, P. et al. (2015) ‘Integrative conjugative elements of the ICEPan family play a potential role in Pantoea ananatis ecological diversification and antibiosis’, Frontiers in Microbiology, 6(576). Available at: https://doi.org/10.21256/zhaw-1472.
P. De Maayer et al., “Integrative conjugative elements of the ICEPan family play a potential role in Pantoea ananatis ecological diversification and antibiosis,” Frontiers in Microbiology, vol. 6, no. 576, Jun. 2015, doi: 10.21256/zhaw-1472.
DE MAAYER, Pieter, Wai-Yin CHAN, Douglas A. MARTIN, Jochen BLOM, Stephanus N. VENTER, Brion DUFFY, Don A. COWAN, Theo H. M. SMITS und Teresa A. COUTINHO, 2015. Integrative conjugative elements of the ICEPan family play a potential role in Pantoea ananatis ecological diversification and antibiosis. Frontiers in Microbiology. 8 Juni 2015. Bd. 6, Nr. 576. DOI 10.21256/zhaw-1472
De Maayer, Pieter, Wai-Yin Chan, Douglas A. Martin, Jochen Blom, Stephanus N. Venter, Brion Duffy, Don A. Cowan, Theo H. M. Smits, and Teresa A. Coutinho. 2015. “Integrative Conjugative Elements of the ICEPan Family Play a Potential Role in Pantoea Ananatis Ecological Diversification and Antibiosis.” Frontiers in Microbiology 6 (576). https://doi.org/10.21256/zhaw-1472.
De Maayer, Pieter, et al. “Integrative Conjugative Elements of the ICEPan Family Play a Potential Role in Pantoea Ananatis Ecological Diversification and Antibiosis.” Frontiers in Microbiology, vol. 6, no. 576, June 2015, https://doi.org/10.21256/zhaw-1472.


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