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dc.contributor.authorMaiolo, Massimo-
dc.contributor.authorVancheri, A.-
dc.contributor.authorKrause, R.-
dc.contributor.authorDanani, A.-
dc.date.accessioned2018-11-16T09:49:33Z-
dc.date.available2018-11-16T09:49:33Z-
dc.date.issued2015-
dc.identifier.issn0021-9991de_CH
dc.identifier.urihttps://digitalcollection.zhaw.ch/handle/11475/12898-
dc.description.abstractIn this paper, we apply Multiresolution Analysis (MRA) to develop sparse but accurate representations for the Multiscale Coarse-Graining (MSCG) approximation to the many-body potential of mean force. We rigorously framed the MSCG method into MRA so that all the instruments of this theory become available together with a multitude of new basis functions, namely the wavelets. The coarse-grained (CG) force field is hierarchically decomposed at different resolution levels enabling to choose the most appropriate wavelet family for each physical interaction without requiring an a priori knowledge of the details localization. The representation of the CG potential in this new efficient orthonormal basis leads to a compression of the signal information in few large expansion coefficients. The multiresolution property of the wavelet transform allows to isolate and remove the noise from the CG force-field reconstruction by thresholding the basis function coefficients from each frequency band independently. We discuss the implementation of our wavelet-based MSCG approach and demonstrate its accuracy using two different condensed-phase systems, i.e. liquid water and methanol. Simulations of liquid argon have also been performed using a one-to-one mapping between atomistic and CG sites. The latter model allows to verify the accuracy of the method and to test different choices of wavelet families. Furthermore, the results of the computer simulations show that the efficiency and sparsity of the representation of the CG force field can be traced back to the mathematical properties of the chosen family of wavelets. This result is in agreement with what is known from the theory of multiresolution analysis of signals.de_CH
dc.language.isoende_CH
dc.publisherElsevierde_CH
dc.relation.ispartofJournal of Computational Physicsde_CH
dc.rightsLicence according to publishing contractde_CH
dc.subject.ddc510: Mathematikde_CH
dc.subject.ddc530: Physikde_CH
dc.titleWavelets as basis functions to represent the coarse-graining potential in multiscale coarse graining approachde_CH
dc.typeBeitrag in wissenschaftlicher Zeitschriftde_CH
dcterms.typeTextde_CH
zhaw.departementLife Sciences und Facility Managementde_CH
zhaw.organisationalunitInstitut für Computational Life Sciences (ICLS)de_CH
dc.identifier.doi10.1016/j.jcp.2015.07.039de_CH
zhaw.funding.euNode_CH
zhaw.originated.zhawYesde_CH
zhaw.pages.end604de_CH
zhaw.pages.start592de_CH
zhaw.publication.statuspublishedVersionde_CH
zhaw.volume300de_CH
zhaw.publication.reviewPeer review (Publikation)de_CH
zhaw.webfeedComputational Genomicsde_CH
Appears in collections:Publikationen Life Sciences und Facility Management

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